MHC binding peptides

1. MHCPEP dataset
    MHCPEP database (flat text format)  reference

2. Datasets for specific MHC molecules
    Datasets for development and testing of computational models for specific MHC molecules

• HLA-A*0101
  • Training dataset 1: IEDB A*0101 dataset (9mer)  (reference)
  • Training dataset 2: IEDB A*0101 dataset (10mer)  (reference)
  • Training dataset 3: CBS A*0101 dataset (9mer)  (reference)
  • Validation dataset 1: survivin dataset (9mer)  (reference)
  • Validation dataset 2: CMV dataset (9mer)   (reference)
  • Validation dataset 3: 5T4 dataset (9mer)   (reference)
  • Combined validation dataset
• HLA-A*0201
  • Training dataset 1: IEDB A*0201 dataset (9mer)  (reference)
  • Training dataset 2: IEDB A*0201 dataset (10mer)  (reference)
  • Training dataset 3: CBS A*0201 dataset (9mer)  (reference)
  • Training dataset 4: Multipred A*0201 dataset (9mer)  (reference)
  • Validation dataset 1: survivin dataset (9mer)  (reference)
  • Validation dataset 2: CMV dataset (9mer)   (reference)
  • Validation dataset 3: 5T4 dataset (9mer)   (reference)
  • Combined validation dataset  (reference)
• HLA-A*0301
  • Training dataset 1: IEDB A*0301 dataset (9mer)  (reference)
  • Training dataset 2: IEDB A*0301 dataset (10mer)  (reference)
  • Training dataset 3: CBS A*0301 dataset (9mer)  (reference)
  • Training dataset 4: Multipred A*0301 dataset (9mer)  (reference)
  • Validation dataset 1: survivin dataset (9mer)  (reference)
  • Validation dataset 2: CMV dataset (9mer)   (reference)
  • Validation dataset 3: 5T4 dataset (9mer)   (reference)
  • Combined validation dataset  (reference)
• HLA-A*1101
  • Training dataset 1: IEDB A*1101 dataset (9mer)  (reference)
  • Training dataset 2: IEDB A*1101 dataset (10mer)  (reference)
  • Training dataset 3: CBS A*1101 dataset (9mer)  (reference)
  • Training dataset 4: Multipred A*1101 dataset (9mer)  (reference)
  • Validation dataset 1: survivin dataset (9mer)  (reference)
  • Validation dataset 2: CMV dataset (9mer)   (reference)
  • Combined validation dataset  (reference)
• HLA-A*2402
  • Training dataset 1: IEDB A*2402 dataset (9mer)  (reference)
  • Training dataset 2: IEDB A*2402 dataset (10mer)  (reference)
  • Training dataset 3: CBS A*2402 dataset (9mer)  (reference)
  • Validation dataset 1: survivin dataset (9mer)  (reference)
  • Validation dataset 2: CMV dataset (9mer)   (reference)
  • Combined validation dataset  (reference)
• HLA-B*0702
  • Training dataset 1: IEDB B*0702 dataset (9mer)  (reference)
  • Training dataset 2: IEDB B*0702 dataset (10mer)  (reference)
  • Training dataset 3: CBS B*0702 dataset (9mer)  (reference)
  • Training dataset 4: Hotspot Hunter B*0702 dataset (9mer)  (reference)
  • Validation dataset 1: survivin dataset (9mer)  (reference)
  • Validation dataset 2: CMV dataset (9mer)   (reference)
  • Validation dataset 3: 5T4 dataset (9mer)   (reference)
  • Combined validation dataset  (reference)
• HLA-B*0801
  • Training dataset 1: IEDB B*0801 dataset (9mer)  (reference)
  • Training dataset 2: CBS B*0801 dataset (9mer)  (reference)
  • Validation dataset 1: survivin dataset (9mer)  (reference)
  • Validation dataset 2: CMV dataset (9mer)   (reference)
  • Combined validation dataset  (reference)
• HLA-B*1501
  • Training dataset 1: IEDB B*1501 dataset (9mer)  (reference)
  • Training dataset 2: CBS B*1501 dataset (9mer)  (reference)
  • Validation dataset 1: survivin dataset (9mer)  (reference)
  • Validation dataset 2: CMV dataset (9mer)   (reference)
  • Combined validation dataset  (reference)
• HLA-DRB1*0101
  • Training dataset: IEDB DRB1*0101 dataset  (reference)
  • Validation dataset  (references)
• HLA-DRB1*0301
  • Training dataset: IEDB DRB1*0301 dataset  (reference)
  • Validation dataset  (references)
• HLA-DRB1*0401
  • Training dataset: IEDB DRB1*0401 dataset  (reference)
  • Validation dataset  (references)
• HLA-DRB1*0701
  • Training dataset: IEDB DRB1*0701 dataset  (reference)
  • Validation dataset  (references)
• HLA-DRB1*1101
  • Training dataset: IEDB DRB1*1101 dataset  (reference)
  • Validation dataset  (references)
• HLA-DRB1*1301
  • Training dataset: IEDB database DRB1*1301  (reference)
  • Validation dataset  (references)
• HLA-DRB1*1501
  • Training dataset: IEDB DRB1*1501 dataset  (reference)
  • Validation dataset  (references)